PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950553.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 226aa    MW: 25871.2 Da    PI: 9.4246
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950553.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.3e-32149207159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++ +prsYYrCt ++C+vkk+ver aedp++v++tYeg+H h+
  XP_022950553.1 149 LDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHS 207
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGSSASEEDL IMATLLQAEQ AAAITTNFAS FPENINNLVQ QTLKPFLFFK ADDQYSLQQQ  60
QQQQQQQQSV FPFPLPSTTA TDTATSHLLS SLLRSSPSSV RDAEERGNDG DNRKGGLRVR  120
TVKMKRMKGR RKVREPRFCF KTMTDVDVLD DGYKWRKYGQ KVVKNTLHPR SYYRCTEENC  180
KVKKRVERLA EDPRMVITTY EGRHAHSPSD PNLEHTNMGC LNTLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.17e-46WRKY family protein