PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950688.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 263aa    MW: 29292.9 Da    PI: 9.4898
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950688.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.6e-092167347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT eE +++ +a +++ ++   +W ++a++++ g+t  ++  +++ +
   XP_022950688.1 21 NWTVEENKRFENALALFDSDssdRWLKVAAMIP-GKTVGDVMKHYREL 67
                     8********************************.***********975 PP
2Myb_DNA-binding47.54e-15127171347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022950688.1 127 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 171
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MIRGIGTLAP ATDRRSSSCS NWTVEENKRF ENALALFDSD SSDRWLKVAA MIPGKTVGDV  60
MKHYRELVAD VSDIEAGLVP IPGYATGNSF VLEWSNDGCG FGSVYDGAGK RGVSGRPSDH  120
ERKKGVPWTE EEHRQFLMGL KKYGKGDWRN ISRNFVTTRT PTQVASHAQK YFIRQLTGGK  180
DRRRSSIHDI TTVNLPDNLT HPNTKSPYSP ILYDGVTPNC GISSLGPKLL QDRIFVGGNI  240
HGCENIGPYS RNVFQVQREQ QYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-99MYB family protein