PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950741.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 234aa    MW: 26453 Da    PI: 5.6338
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950741.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-0831542448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia++++  Rt++++k++w+++l
   XP_022950741.1 31 WAAIASYLP-QRTDNDIKNYWNTHL 54
                     *********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDQLPETRNQ ERQLHAPRGR NDHPFASFIG WAAIASYLPQ RTDNDIKNYW NTHLKKKLKS  60
ALDHSTTTEF FSKGFFNDSF TRTFNFDSSS ASASVSASCF CPNRSSAASP SSSSSTYYSS  120
AENISRLLEG WMRSSPKTND NPFHFDEKQS HRGDSVVSNQ CQEVKTEQDG NRVGSMKEIE  180
SMVSLDNLGA SCEKDNKQNR SENDNNPPMS FLEKWLLDDT SVQVEEMMPL SPMF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15460LKKKLKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.26e-28MYB_related family protein