PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950748.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 276aa MW: 31070.5 Da PI: 5.6998

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950748.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8.3e-13	126	172	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++ErrRR+++ ++f+ L l+P + K +Ka++L A++Y+k+Lq XP_022950748.1 126 QHVIAERRRREKLSQSFAALSALIPGL-----NKTDKASVLGGAIKYVKELQ 172 699*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MEISSPKWLS ELEMMDCAYQ HEITNYPHDY TLDELNFPTN FPATEKLLTS VQLDSISSSQ 60 FISFGDSPEI EKLDCAMGKD ERGKDLSFII PQSLDVNQNR YAIGYEEGHD ITKRATIGRT 120 SGNGQQHVIA ERRRREKLSQ SFAALSALIP GLNKTDKASV LGGAIKYVKE LQERVKWAEE 180 EAGDEEGRVI KSVPKIETRV LERDVLVRIH CKKQKGCFSN ILTQIQMLKL TIVNSSVLPF 240 GHSRLDITII AQMEVGFCMT ATDLGNKLTQ TLLEFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	136	ERRRRE
2	132	137	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-43	bHLH family protein