PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950828.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 405aa    MW: 45678 Da    PI: 7.5884
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950828.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.74.3e-187100199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                     ffk+l++ +   +  l++pkkf++++g+    s  ++l+ ++g +W+v l++  + g+++l+kGW +F++   L+ g  +vF+l+gr s+f   v
  XP_022950828.1   7 FFKILLHRNLEDQ-KLMIPKKFVKKYGK--LLSSAVILKLPDGMKWKVGLTMAAN-GAVWLQKGWHKFANHYSLEFGSLLVFRLEGRsSSF--EV 95 
                     7888866555555.5***********84..47889***************65444.469**************************998888..99 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++f+ 
  XP_022950828.1  96 TIFDP 100
                     99885 PP
2B347.24.1e-15152233187
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                     f+ vl +s+v  + ++ +p  f +eh +++ +s  ++l++  +++W v+l  +++ g + +++GW++F  +ngLk+gD+++F+++g+
  XP_022950828.1 152 FQVVLNQSNVCGRYNMNIPLAFGKEHFSPEMKS--VKLQT-GNKEWMVTL--KQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGS 233
                     778899999999999***********9887665..77655.78*******..88888899***********************8775 PP
3B335.32.1e-11242331198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv+  +d ++++ ++ p   +++ +g+   + + +++d+ g+sW+++l  +k ++ +++++GW  Fv+   Lk  Df+ F++dg+ +f   v 
  XP_022950828.1 242 FFKVF-IPDFGSLH-MSRPPASVKHLNGS--FPEKAIIKDPMGKSWRITL--EKLDDLVYFKNGWPAFVDYYFLKYEDFLAFQYDGHCTF--DVE 328
                     67777.44777777.77788888655666..566899*************..***999***************************98888..787 PP

                     EE- CS
              B3  96 vfr 98 
                     +f 
  XP_022950828.1 329 IFG 331
                     776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MASSPQFFKI LLHRNLEDQK LMIPKKFVKK YGKLLSSAVI LKLPDGMKWK VGLTMAANGA  60
VWLQKGWHKF ANHYSLEFGS LLVFRLEGRS SSFEVTIFDP SGLESEYSSF HACDSITESE  120
EDDDSVSDSD EEDYEIGVSR RRRKSATEKP GFQVVLNQSN VCGRYNMNIP LAFGKEHFSP  180
EMKSVKLQTG NKEWMVTLKQ YEGCMRFSGG WRKFYGENGL KDGDTCLFEM HGSTSAASSL  240
EFFKVFIPDF GSLHMSRPPA SVKHLNGSFP EKAIIKDPMG KSWRITLEKL DDLVYFKNGW  300
PAFVDYYFLK YEDFLAFQYD GHCTFDVEIF GTNGCKKAVA AKAASCIPIL EAVAADAANS  360
VPILKVKEDA KHSISSKRTR LQVGSVYFWT YGEGSEHLVE TKHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-21B3 family protein