PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950846.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 233aa    MW: 26398.8 Da    PI: 10.9861
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950846.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-0952102353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  Kl Ka +L ++++ +k+
  XP_022950846.1  52 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 102
                     68*************************55.9****************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVLLHQVMQS IQSYPTSGTM HQMYPQGQPL MIKHYSPISS FPRKENTLHA AQKHRLAEQS  60
RRNRISGQYD TLRAILPSIY KTDMSKLKKA FVLSETIRMV KEFKKLVSEK RATNREVGNC  120
GIPGGADRLS LEHCDGGEGM VKAVMSCEDR PNIMAELAKA LKTVKVKLVR AEMVTMGGRN  180
KFSLWMQGPK EGPGVLKRVL EAVMRRPSWI ARKHRSSWHS RASTAYNFNR ATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.11e-22bHLH family protein