PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950847.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 230aa    MW: 25977.3 Da    PI: 11.0059
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950847.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-0958108353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  Kl Ka +L ++++ +k+
  XP_022950847.1  58 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 108
                     68*************************55.9****************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MESLHNRASS GQVMQSIQSY PTSGTMHQMY PQGQPLMIKH YSPISSFPRK ENTLHAAQKH  60
RLAEQSRRNR ISGQYDTLRA ILPSIYKTDM SKLKKAFVLS ETIRMVKEFK KLVSEKRATN  120
REVGNCGIPG GADRLSLEHC DGGEGMVKAV MSCEDRPNIM AELAKALKTV KVKLVRAEMV  180
TMGGRNKFSL WMQGPKEGPG VLKRVLEAVM RRPSWIARKH RSSWHSRASK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.13e-22bHLH family protein