PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951027.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 228aa MW: 24151.2 Da PI: 9.6821

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951027.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00024	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y Cp C+k+Fs+ L H +H XP_022951027.1 72 YNCPLCDKVFSSYQALGGHKTSH 94 89**********99998888777 PP
2	zf-C2H2	15.1	6.6e-05	124	146	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+ksF++ L H r+H XP_022951027.1 124 HVCNVCHKSFPTGQALGGHKRRH 146 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MALEALNSPT MAAPPPFDKP LKPWVKRKRS PRPSLDGAPS EEEYLALCLI MLARGGASPS 60 PPKPVAAVKS AYNCPLCDKV FSSYQALGGH KTSHRKPASV DDQSTSVSGA TSSTTTSTSG 120 GRAHVCNVCH KSFPTGQALG GHKRRHYEGG SAAFGNRQSY SGITMTSSEG VGSTHTGSHS 180 HRNFDLNIPA SAALSPKLLF AGDQEVESPL PTKKPRLFWL PEPENSLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	1e-47	C2H2 family protein