PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951048.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 188aa MW: 19884.9 Da PI: 7.9458

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951048.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	1.9e-05	22	44	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cg F++ L+ H+r+H XP_022951048.1 22 FKCGFCGSEFRSEKALHGHMRSH 44 89********************9 PP
2	zf-C2H2	13.9	0.00016	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cgk F ++ L H +++ XP_022951048.1 137 YPCDFCGKAFASPQALGGHKSSC 159 99*************99998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MGKRKAADGD GDCDGSDRKN RFKCGFCGSE FRSEKALHGH MRSHPERNWR GMNPPVSAAA 60 AAAAAVAATG SFSSSSSSGG VDHEVRDRDC YSPLLTWSTT ACRGRRPIGS SSSASSGVVD 120 ATDTGKENTD ALLRNEYPCD FCGKAFASPQ ALGGHKSSCP CKPRKNGPQE AKLLRFDLNE 180 LPPEDGEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	1e-09	C2H2 family protein