PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951167.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 552aa MW: 62351.6 Da PI: 5.1594

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951167.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.8	1.4e-24	198	251	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fveav+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022951167.1 198 KARVVWSVDLHQKFVEAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 251 68*****************.9*****************************8 PP
2	Myb_DNA-binding	38.7	2.4e-12	200	250	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_022951167.1 200 RVVWSVDLHQKFVEAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 250 678***********************************************7 PP
3	Response_reg	82.5	1.3e-27	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_022951167.1 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCCLAREALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 111 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_022951167.1 112 ACDYLLKPIRMKELRN 127 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MENGFSSPRS DVFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALSLLRERK 60 DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVLRKKIQEG RDIEGHDVFE GLQILRNGSD RYDDSQFLRV EELFSVRKRK 180 DVDKYEEKEF GETCSTKKAR VVWSVDLHQK FVEAVNQIGF DKVGPKKILD LMNVPWLTRE 240 NVASHLQKYR LYLSRLQKEN DPKACFVVGM KQTDSSLKDG DGNFSVCSSL GVPQTDVTNS 300 SFSFLGDNFL HNVDSIGCEA DRKRVVQEQT SEPKRAAATE LIKTRCTHMK FNNSFASVES 360 EGKLVACYPW VEAPQMKLKQ ESKPHQVQIN QLPSVSSISS GRSATEKDKG SSIESKDCSQ 420 QMVHLNPPKP PTDSFSGKAK SFNEINDHFE PISTATAPLG VKNQNVIDLS SISTDLGSGF 480 PFSSFDEDLQ GYLIQDGCYP KNLEQIIEFP DYGDPGIFTE GPTHLYDAMR FGYEYSYDPT 540 EYPVIDEGLF IA

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MENGFSSPRS DVFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALSLLRERK  60
DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVLRKKIQEG RDIEGHDVFE GLQILRNGSD RYDDSQFLRV EELFSVRKRK  180
DVDKYEEKEF GETCSTKKAR VVWSVDLHQK FVEAVNQIGF DKVGPKKILD LMNVPWLTRE  240
NVASHLQKYR LYLSRLQKEN DPKACFVVGM KQTDSSLKDG DGNFSVCSSL GVPQTDVTNS  300
SFSFLGDNFL HNVDSIGCEA DRKRVVQEQT SEPKRAAATE LIKTRCTHMK FNNSFASVES  360
EGKLVACYPW VEAPQMKLKQ ESKPHQVQIN QLPSVSSISS GRSATEKDKG SSIESKDCSQ  420
QMVHLNPPKP PTDSFSGKAK SFNEINDHFE PISTATAPLG VKNQNVIDLS SISTDLGSGF  480
PFSSFDEDLQ GYLIQDGCYP KNLEQIIEFP DYGDPGIFTE GPTHLYDAMR FGYEYSYDPT  540
EYPVIDEGLF IA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-121	ARR-B family protein