PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951216.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 332aa MW: 36747.4 Da PI: 5.6147

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951216.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.5	7.7e-16	51	100	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + ++ L +++eY+++Lq XP_022951216.1 51 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTVSFLLEVIEYVQYLQ 100 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MRTAKSIQED EEYEEDELVA KREGPASSYN ANSSIGNSKD GKNDDKANAI RSKHSVTEQR 60 RRSKINERFQ ILRDLIPHSD QKRDTVSFLL EVIEYVQYLQ EKVQKYEGSY QNWSGEPTKL 120 IPWRNSHWRM PTFVGHPESV KNGSASGPMY SGKFDDNNIS ISPAMLASSQ NPLESHAGRD 180 ILQDADITNK VPLPMSLEGN THASIRSDGV HDQSLHVPIS DAQTTECPIT NNASSQPEEM 240 SIQGGTISVS SLYSEGLLNS LTQALQNTGL DLSQASISVQ IDLGKRANKR TPCGTPIYKE 300 TGNPPSGHPS LAHEGDLDSE DDSDQVKKRR RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-100	bHLH family protein