PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951223.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 208aa    MW: 23187.3 Da    PI: 8.8588
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951223.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.2e-141462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++Ed  l+ +v+ +G+  tW + + + g++R++k+c++rw++yl
   XP_022951223.1 14 KGPWSPDEDATLKLYVETHGTAgTWIALPTKAGLKRCGKSCRLRWLNYL 62
                     79******************99*************************97 PP
2Myb_DNA-binding52.79.7e-1769111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T++Ed l+ ++ +q+G++ W++Ia+ ++ gRt++++k++w++
   XP_022951223.1  69 GDFTEDEDNLIFNLYNQYGSR-WSSIASQLP-GRTDNDVKNHWNT 111
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPD EDATLKLYVE THGTAGTWIA LPTKAGLKRC GKSCRLRWLN  60
YLRPNIKHGD FTEDEDNLIF NLYNQYGSRW SSIASQLPGR TDNDVKNHWN TKLKKKKKLL  120
VAAGKTKLQT MSSTETSLPQ TISNSAGFDS VAQFQTPNVS PSSFSDMVPG GSGYGRDEWG  180
LMEDWGCDFS PDMICSMFFK EKNGKLCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113119LKKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.14e-63MYB family protein