PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951393.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 314aa    MW: 35134.9 Da    PI: 8.0905
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951393.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-051942331155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YI+ Lq
  XP_022951393.1 194 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 233
                     57788999*********998.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDFSANFHHQ LQLENQLLLG SGNGHAWNPD VTFSPSCDFE PSFHLQDMNP ATIIDGESCY  60
TYTSLQHYFH GSKDKKFIEK GEEEASASSP KTNGTLNSHC CSFEDLNKIA QSCCCCSTKI  120
HPTLNVSSRQ PLMAELSSFF GFDHTVPFQQ STKMPNHEIT QAKRPCSLKQ QKPIQAPPKK  180
PRVEPRATCP PLKIRKEKLG DRIAALQQLV APFGKTDTAS VLMEAISYIN FLQNQVEMLS  240
HSYMKSCRSK NYKTTCRDES NEKDKKPESD LKAKGLCLVP TSCISYLPED TSTGGRIGNI  300
WPPLTAASFN RRTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-40bHLH family protein