PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951394.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 312aa    MW: 34906.6 Da    PI: 8.2127
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951394.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.7e-051942331155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YI+ Lq
  XP_022951394.1 194 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 233
                     57788999*********998.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDFSANFHHQ LQLENQLLLG SGNGHAWNPD VTFSPSCDFE PSFHLQDMNP ATIIDGESCY  60
TYTSLQHYFH GSKDKKFIEK GEEEASASSP KTNGTLNSHC CSFEDLNKIA QSCCCCSTKI  120
HPTLNVSSRQ PLMAELSSFF GFDHTVPFQQ STKMPNHEIT QAKRPCSLKQ QKPIQAPPKK  180
PRVEPRATCP PLKIRKEKLG DRIAALQQLV APFGKTDTAS VLMEAISYIN FLQNQMLSHS  240
YMKSCRSKNY KTTCRDESNE KDKKPESDLK AKGLCLVPTS CISYLPEDTS TGGRIGNIWP  300
PLTAASFNRR TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-37bHLH family protein