PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951531.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 223aa    MW: 25851.3 Da    PI: 9.6261
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951531.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.33e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskR++g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss
  XP_022951531.1  9 KRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSS 59
                    79***********************************************96 PP
2K-box1011.7e-338617610100
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +e  +e+++ e+ +Lk+++e Lqr++ h++GedL+sLs+keLq+Leqq++++lk++Rs+Kn+l++++i+ lq+ke+++qe+n  L k+++e
  XP_022951531.1  86 SEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKE 176
                     555689**********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRKAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSSD  60
SSMEKILERY ERYSYVGRQQ IAATESEFSQ ENWTLEYYRL KSRVELLQRN NSHYMGEDLD  120
SLSVKELQNL EQQIDTALKH VRSRKNQLMH DSISALQRKE RAIQEQNALL AKQIKEKEKS  180
VAMAQQAEWE QQQQHGYNAL SFLFPSAPHP SLNIGLASFD GHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.18e-99MIKC_MADS family protein