PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951637.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 375aa    MW: 41207.8 Da    PI: 6.2277
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951637.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.6e-18262296135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022951637.1 262 CMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 296
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MEAPEYFHNN AYCSQFTSDK DAAAATTADH FIVEELLDFS NDDDSAIADS GGFFNNVTCF  60
LNGNSAESSA ATAVESSNSS SFSGSERTSF FDDVSASSLA DVRFSDDIFI PYNELVELEW  120
LASFEEEPFS SEDMQKLELI TGVKVKPDEP PQSHHPTNAV SALSHGRNAA AAIFKPDIVA  180
VPAKARSKRS RTIPSNWNNS RLLPLSPTSS SSELDIPATE PPPHPVKKVP PKVAATATAA  240
VKKKESSSSS ETGMSAGEGR KCMHCATDKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY  300
RPAASPTFVL TKHSNSHRKV LELRRQKELQ KAQEQQALMM DHHHHHHHQE MMFDSSNGED  360
YLMKQNVAHD YLHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.19e-45GATA family protein