PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951685.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27513.9 Da PI: 5.4561

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951685.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.7	2e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+i+fs+ gklye+ss XP_022951685.1 9 KKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSTGGKLYEFSS 59 68***********************************************96 PP
2	K-box	86.6	5.1e-29	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++e++++e+ kLk+e+e Lq++qR++lGe+Le+L+ keL qLe qLe+slk+iR +Kn+ +++q++el+kke+ l e+n+aLr+klee XP_022951685.1 82 HHLKDTEKWYEEYLKLKEEVEGLQHSQRRILGEELEDLETKELDQLEIQLETSLKQIRFTKNQTVFDQLSELKKKEELLLETNQALRRKLEE 173 456789***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRGKVELKK IENKINRQVT FTKRRNGLLK KAYELSILCD AEVALIVFST GGKLYEFSSS 60 SSIAKTLERY QRHSYGALAA SHHLKDTEKW YEEYLKLKEE VEGLQHSQRR ILGEELEDLE 120 TKELDQLEIQ LETSLKQIRF TKNQTVFDQL SELKKKEELL LETNQALRRK LEESSAGLHS 180 SWEASEPNNL HYCGQPEAFL QGNNIALENS YNPAEVSNQE NAINSEPEGN ELPSHWMML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03710.2	3e-53	MIKC_MADS family protein