PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951712.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 415aa MW: 47681.3 Da PI: 6.6765

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951712.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.5	7.3e-26	157	222	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ lt+kf++l++++e+g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek+ n+irwkg XP_022951712.1 157 RYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADIL---KV--QKRRIYDITNVLEGIGLIEKTTTNHIRWKG 222 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MLNAVEDLLL RHGHSDFRSH LLPSHSHHRG DMSLSSSSAS SSLARPIPQC FRQYHRSSPP 60 SDQSNACDGR LALDAHSTVA MLDLKRTYDI NDSEALASKR AVASEQRMRS NDSSCEPVSN 120 ATEKQNKKLK LQKNSKSRTK KSTDENLDGP NLSTNGRYDS SLGFLTKKFI RLVQEAEDGT 180 LDLNKTADIL KVQKRRIYDI TNVLEGIGLI EKTTTNHIRW KGGVRHEAQE LNDQVGRFKA 240 EVKSLYADER RLDELIRMKQ ELLRNLEENE NHRKNLFMTE EDILQIPCFK NQTLIAVKAP 300 QASYIEVPDP DEEACFSERQ CRLIIKSTTG PIDLYLLRTE KQELEESTFH QEKVCSERQK 360 NHKISTNDTY CSSSFQEFQG MQRILPLYNN MDDDYWFESN SQVSITHLWG EEHNF

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MLNAVEDLLL RHGHSDFRSH LLPSHSHHRG DMSLSSSSAS SSLARPIPQC FRQYHRSSPP  60
SDQSNACDGR LALDAHSTVA MLDLKRTYDI NDSEALASKR AVASEQRMRS NDSSCEPVSN  120
ATEKQNKKLK LQKNSKSRTK KSTDENLDGP NLSTNGRYDS SLGFLTKKFI RLVQEAEDGT  180
LDLNKTADIL KVQKRRIYDI TNVLEGIGLI EKTTTNHIRW KGGVRHEAQE LNDQVGRFKA  240
EVKSLYADER RLDELIRMKQ ELLRNLEENE NHRKNLFMTE EDILQIPCFK NQTLIAVKAP  300
QASYIEVPDP DEEACFSERQ CRLIIKSTTG PIDLYLLRTE KQELEESTFH QEKVCSERQK  360
NHKISTNDTY CSSSFQEFQG MQRILPLYNN MDDDYWFESN SQVSITHLWG EEHNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	196	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	4e-79	E2F/DP family protein