PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951726.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 285aa    MW: 31563 Da    PI: 10.6098
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951726.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.5e-1499143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky
   XP_022951726.1  99 PWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKY 143
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVRKCSHCGN VGHNSRTCII QKEKIRGKFK LFGVHLDGVS SSSAAATVAG AAAAALLKKS  60
ISLDCLPSSS SSSSCEKLSN GYLSDDLITK THERKKGVPW TEEEHRMFLV GLQKLGKGDW  120
RGISRKFVTT RTPTQVASHA QKYFLRLNSL DKRKHRRPSL FDVATRDKFR VQVVKGNNSK  180
PSNLPPSISF GIPSNSTPIH NHVHQSLLPI WFGYEDHKAV KFVENPIKCS SSSSHFHGKQ  240
KTKSHHQAPD LQLSLSTPKP VEQAEQQQQQ HCCRNIPING AISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151158DKRKHRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.13e-54MYB_related family protein