PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951765.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 300aa    MW: 34257.4 Da    PI: 8.6132
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951765.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.46.1e-171462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl
   XP_022951765.1 14 KGPWSAEEDTKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding36.89.3e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
   XP_022951765.1  69 GGFSEEEDRIICSLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGRAPCCDKA NVKKGPWSAE EDTKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDRIIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGK  120
QRKDHHQQQQ QATRRGNALR HHGTVNKSNS AIPYWPQQQQ FPVAPSYYNN MLSSDHINPI  180
ENLSKFGAQF MEQSVYNNNN ANGYGNGYYF PLLQGQSSSQ MVDLENYDMG FDDPRRVLCG  240
FEFLYGDHHN QIMGTSNSHG YEMGPLISSC PSNYEAMLQD LSTTTQEYDT HLKIMDSNAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.16e-83MYB family protein