PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951820.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 394aa MW: 44565.3 Da PI: 8.1295

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951820.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.5	3.8e-21	32	112	11	97
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++++ lvlp+kfa+ ++kk+ + t+tl+ +sg +W+v l + ++++ +++ GW+eFv+a+ L+++D +vF+++g s+f v vf XP_022951820.1 32 GSEQKLVLPNKFAN--NLKKKLPSTVTLKGPSGATWDVGL--SANDDKLYFKHGWQEFVRAHSLEQNDLLVFRYNGASQF--DVLVF 112 56778*****94..45566999************..*******************************99999..66666 PP
2	B3	40.8	4e-13	275	370	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..grsefelv 93 f+ ++ ps+v ++ l +p + ++++ + ++++++l+ + + +W k++++ +++ lt+GWk+F+ +n+L+e D++vF+ + + l XP_022951820.1 275 FKVIMRPSHVYRRFYLFIPTQWVTKNLSL--CNQDVILR-LGNDEWPAKFNFTASRQCGGLTSGWKHFAIDNNLEEFDVCVFEPVpiTSGPVVLE 366 778899******************555..44455543.45577777777755555556*********************442133444455 PP EEEE CS B3 94 vkvf 97 vk+f XP_022951820.1 367 VKIF 370 5655 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDKVSDSSNK WAEDIYWSHF QFTHFYQILA GGSEQKLVLP NKFANNLKKK LPSTVTLKGP 60 SGATWDVGLS ANDDKLYFKH GWQEFVRAHS LEQNDLLVFR YNGASQFDVL VFDWKSFCEK 120 EASYFVKICE HKNSDTGHKA KRKFGEPTLD SFDVDANNGA ECASSENNMH DDSMERMIQD 180 VVSKATNLNG QPEVFSAQPI RTIRTRRRKE TPKSAAVMTP TPAPVQLSDS DEEATPVKKT 240 GSYAEQYLSN RRAITEEDKN NALKLAEAAS SNAGFKVIMR PSHVYRRFYL FIPTQWVTKN 300 LSLCNQDVIL RLGNDEWPAK FNFTASRQCG GLTSGWKHFA IDNNLEEFDV CVFEPVPITS 360 GPVVLEVKIF RVVEDVIPLT RVSAKSNRKL IKAN

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDKVSDSSNK WAEDIYWSHF QFTHFYQILA GGSEQKLVLP NKFANNLKKK LPSTVTLKGP  60
SGATWDVGLS ANDDKLYFKH GWQEFVRAHS LEQNDLLVFR YNGASQFDVL VFDWKSFCEK  120
EASYFVKICE HKNSDTGHKA KRKFGEPTLD SFDVDANNGA ECASSENNMH DDSMERMIQD  180
VVSKATNLNG QPEVFSAQPI RTIRTRRRKE TPKSAAVMTP TPAPVQLSDS DEEATPVKKT  240
GSYAEQYLSN RRAITEEDKN NALKLAEAAS SNAGFKVIMR PSHVYRRFYL FIPTQWVTKN  300
LSLCNQDVIL RLGNDEWPAK FNFTASRQCG GLTSGWKHFA IDNNLEEFDV CVFEPVPITS  360
GPVVLEVKIF RVVEDVIPLT RVSAKSNRKL IKAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-74	B3 family protein