PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951842.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 398aa MW: 44105.7 Da PI: 9.383

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951842.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.8	1.2e-54	64	191	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL +k+++ +++ +++++vd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_022951842.1 64 LPPGFRFHPSDEELITYYLLNKISDANFTG-RAVTDVDLNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNT 157 79***********************999.88***********99999************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfykgrap+gekt+Wvmheyrl XP_022951842.1 158 dTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRL 191 77888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MLTKKEKKNP IKQPKNNQDS MQVSSGDNLG TEKDGKTPEV MKKNTVAESD RNHQDHAQEQ 60 DQTLPPGFRF HPSDEELITY YLLNKISDAN FTGRAVTDVD LNKFEPWELP GKAKMGEKEW 120 YFFSLRDRKY PTGVRTNRAT NTGYWKTTGK DKEIFNTDTS ELVGMKKTLV FYKGRAPRGE 180 KTNWVMHEYR LHSKTAFRTA KDEWVVCRVF QKSAGPKKYP PNQTRAVNPY VNLEIAPPLL 240 PPPLMQLGDP AAQYGYGRNY ITGADLAELN RVLRAGGGGS GSGGSTHGIN LSMQPQFNYQ 300 PAGGCFTISG LNLNLGGASS QPVLRPMPPP VAAPMKIGQQ DIGSSVMAAT MANSSVIAST 360 IGPETAYGAE ISNNGNGPGN RFMNMDHCMD LENYWQNW

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MLTKKEKKNP IKQPKNNQDS MQVSSGDNLG TEKDGKTPEV MKKNTVAESD RNHQDHAQEQ  60
DQTLPPGFRF HPSDEELITY YLLNKISDAN FTGRAVTDVD LNKFEPWELP GKAKMGEKEW  120
YFFSLRDRKY PTGVRTNRAT NTGYWKTTGK DKEIFNTDTS ELVGMKKTLV FYKGRAPRGE  180
KTNWVMHEYR LHSKTAFRTA KDEWVVCRVF QKSAGPKKYP PNQTRAVNPY VNLEIAPPLL  240
PPPLMQLGDP AAQYGYGRNY ITGADLAELN RVLRAGGGGS GSGGSTHGIN LSMQPQFNYQ  300
PAGGCFTISG LNLNLGGASS QPVLRPMPPP VAAPMKIGQQ DIGSSVMAAT MANSSVIAST  360
IGPETAYGAE ISNNGNGPGN RFMNMDHCMD LENYWQNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-108	NAC family protein