PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951876.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 105aa    MW: 11692.9 Da    PI: 5.0905
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951876.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-081258246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     ++W++   + + +a + + ++   +W + a  +g g+t++++k ++ +
   XP_022951876.1 12 NSWSPKQNKVFENALTVYDKDspdRWQKLAGAVG-GKTAEEVKRHYEM 58
                     58********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
SSSSSSSSSS SNSWSPKQNK VFENALTVYD KDSPDRWQKL AGAVGGKTAE EVKRHYEMLV  60
EDVHNIEIGR IPLPNYSNSS DQYYSNEQRL ISFSIGCISE LICIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.11e-28MYB_related family protein