PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951977.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 335aa    MW: 36262.4 Da    PI: 4.7936
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951977.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.84.5e-16211247135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_022951977.1 211 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 247
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAAANPQPLQ ARPFQEHVQV STVMGDDDGE YEDGGGGGGG GGGGGGGGDV MDDVEEAHMT  60
SVSVANLGGL VMASRTSELT LSFEGEVYVF PAVTPEKVQA VLLLLGGRDV PTSVPTMEVP  120
YDHMNRGMVD TPKRSNLSRR IASLVRFREK RKERCFDKKI RYTVRKEVAQ RMHRKNGQFA  180
SLKESSGASS WESAHSCLQD GTRSETVLRK CQHCGVSENN TPAMRRGPAG PRTLCNACGL  240
MWANKGTLRD LSKGGRNVSV DHTEPETPMD VKPTIMEGEF SGIPDEHDIN ETTGGQTNSL  300
PMQIVNDSTN DDEQEPLIEL PNPSDTDIDI PTNFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130135DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-67GATA family protein