PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951980.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 285aa    MW: 31428.8 Da    PI: 7.6357
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951980.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.51.6e-17206239132
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 
                     C+nCgt++  Tp++Rrgp+g+++LCnaCGl+++ 
  XP_022951980.1 206 CTNCGTSSmaTPMMRRGPSGPRSLCNACGLFWAN 239
                     ********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MYGRPQPLTV GDQIASVPDC GDGGEPLDNR LVRYGAHALE DGAGVGGMIE DLNPDAVYAS  60
AGDGSDMAIQ RSDGSSQLTL SFRGQVYLFD AVSPEKVQAV LLLLGGSELS SGQQSVDLVT  120
QSQRNAVDFP GRSSQPQRAA SLNRFRQKRK ERCFDKKVRY GVRQEVAFRM QRNKGQFTSS  180
KKPDGSYSHG SVSEQVQEES PLETLCTNCG TSSMATPMMR RGPSGPRSLC NACGLFWANR  240
IVWLMDMPDL CKGLIGFYDV RCVIFMLFHT CMKFFVIDIL FAWMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.26e-68GATA family protein