PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952028.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 302aa MW: 34173.7 Da PI: 6.3692

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952028.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	114	166	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+ XP_022952028.1 114 QRMTHIAVERNRRKQMNEYLAVLRSLMPCS---YVQRqGDQASIIGGAINFVKELE 166 79*************************7...66666*************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MMALETVVYP QNRDTFTYVG RDFCSYGGAW PGYDYGFQLE QEKSFLENPQ KLPTNWEPSP 60 EECSINQPLS VGALYPPMEV EQSPPSPPSP PPTTGRRKRR RTRNMKNKEE IENQRMTHIA 120 VERNRRKQMN EYLAVLRSLM PCSYVQRQGD QASIIGGAIN FVKELEQQLQ FIKAHKEPTA 180 SSPFADFFSF PQFSTPATNS THDSASSNTQ WAAGDIEVTM VDTHANLKIL SKKRPRQLLK 240 MVAGFQSLRF SVLHLNVTTL DQMVLYSVSI KIEEGCELNT VDEIAAAVNQ ILLSIQEESA 300 FS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	101	RKRRR
2	97	102	RKRRRT
3	115	126	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-77	bHLH family protein