PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952052.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YB

Protein Properties

Length: 217aa MW: 24206.2 Da PI: 6.6687

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952052.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	161.2	1.5e-50	61	157	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pian++rim+++lP++akis+dake++qecvse+isf+tsea+++cqre+rkt++++d+lwa+++lGf++y++pl v+l+ yrele+ XP_022952052.1 61 VREQDQYMPIANMIRIMRRILPSHAKISDDAKEIIQECVSEYISFITSEANEQCQREQRKTVTAEDVLWAMGKLGFDNYIKPLIVFLNCYRELES 155 69********************************************************************************************9 PP NF-YB 96 ek 97 ++ XP_022952052.1 156 DR 157 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MNLKHLVSAL NVLLTTNKSS PANSNHQQSN SRNVAAKSPV TGSTPASIAA TNNEQSQQCI 60 VREQDQYMPI ANMIRIMRRI LPSHAKISDD AKEIIQECVS EYISFITSEA NEQCQREQRK 120 TVTAEDVLWA MGKLGFDNYI KPLIVFLNCY RELESDRIRT EPIMRRNVDY GPHVGMISPY 180 GQTFQIGHVP TEMFDAMGRY YDGGGNGGSS SGNDSQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	9e-64	NF-YB family protein