PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952214.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 212aa    MW: 23998.5 Da    PI: 7.6687
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952214.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.24.3e-23959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqv fskRr+g++KKA+EL +LCdae+ +++fs +gkl++y+s
  XP_022952214.1  9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS 59
                    689**********************************************86 PP
2K-box27.61.2e-10941712198
           K-box  21 lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      akL++e+e+ ++e+R+++Ge+L+ L l+eL++Le+ L  +l+++ +  +    e i +  +k + l een++L++ +
  XP_022952214.1  94 RAKLNDEVEKKRHELRQMKGEELQGLGLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLV 171
                     58********************************************99999999999999999999999999998866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLLVFSA SGKLFDYASS  60
SMQALLEKHS SVHSENLPNL NEPSVEFQLE SNIRAKLNDE VEKKRHELRQ MKGEELQGLG  120
LEELKKLEKS LLGGLTRVAE MMDGRNAELI CDIGRKVDLL IEENQRLNQL VEKMAYQTHN  180
MQGHSSESIV NNSQDYDSSD TSLKLGLSFL EH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-47MIKC_MADS family protein