PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952292.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 318aa    MW: 35879.7 Da    PI: 6.7219
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952292.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.61.1e-13157204355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + h  +Er+RR+++N++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  XP_022952292.1 157 QDHILAERKRREKLNQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 204
                     57999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MERSSMVVFS EMGMEDNGFV NQWQKSSIDE LGVPLAAAFG EDLQHSYAQS NIDQKASLNR  60
SHNAILGYVK QLKSDGWSSY QTNNHSSNSP VVSYPTASVS ASNYMNQMDF TRPKEEVVCP  120
RSISNLPSDM LVSQDTLRHP SHGTKSTSTN SRIPQAQDHI LAERKRREKL NQRFIALSAI  180
VPGLKKMDKA SVLGDAIKYL KQLQEKVKIL EEQTRRKDIE SVVFINTSNE EDDPLPEIEA  240
RLCDKNVLIR IHCEKKKDVI ENTVAEIEKL HLTIVNSSVM SVGSYALDIT IIAQMDNEFC  300
MTLKDLVRKL QSTLRSFE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168ERKRRE
2164169RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-56bHLH family protein