PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952384.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 223aa MW: 24549.3 Da PI: 8.933

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952384.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+ksFs+ L H +H XP_022952384.1 77 YACSVCNKSFSSYQALGGHKASH 99 89**********99999998887 PP
2	zf-C2H2	11.6	0.00086	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k+F++ L H r+H XP_022952384.1 126 HQCSICFKCFPTGQALGGHKRRH 148 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MALEALNSPT SALAHDQLLN HKPFDPSTHR SKRSKRLRFD SDDEYFAFCL LLLARGRIPD 60 SDTNNKPSSS PSSFPCYACS VCNKSFSSYQ ALGGHKASHR KSDGGDGGEK VSAAITATVS 120 NSCRTHQCSI CFKCFPTGQA LGGHKRRHYD GGSGNNSNSS SFTQTHVREF DLNVPAVPEV 180 WSRFPAGDRR QKSQSQSEKQ YFAEEEVASP HPLKKPRIPI PME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43170.1	3e-36	C2H2 family protein