PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952385.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 197aa    MW: 21791.2 Da    PI: 9.0297
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952385.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00072100122123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C k+F++   L  H r+H
  XP_022952385.1 100 HQCSICFKCFPTGQALGGHKRRH 122
                     79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MALEALNSPT SALAHDQLLN HKPFDPSTHR SKRSKRLRFD SDDEYFAFCL LLLARGRIPD  60
SDTNTLGGHK ASHRKSDGGD GGEKVSAAIT ATVSNSCRTH QCSICFKCFP TGQALGGHKR  120
RHYDGGSGNN SNSSSFTQTH VREFDLNVPA VPEVWSRFPA GDRRQKSQSQ SEKQYFAEEE  180
VASPHPLKKP RIPIPME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.18e-26C2H2 family protein