PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952488.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 150aa    MW: 17071.5 Da    PI: 8.8134
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952488.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.6e-08771161554
                     HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     +i + +++Lr l+P+ + + +s K+s + +L+++++YI++L
  XP_022952488.1  77 QIIELISKLRHLVPEiR-HRRSDKVSASKVLQETCNYIRNL 116
                     67789**********77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
PNSHSFLPTI CLLHIQHFHH TLSLSLSLSL SSFLFITLIT SPPSPFNPNF FSHQLNTHTI  60
STRRSRQPGA SRISDDQIIE LISKLRHLVP EIRHRRSDKV SASKVLQETC NYIRNLHREV  120
DDLSERLSQL LSTIDADSAE AAIIRSLIMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.14e-41bHLH family protein