PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952492.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 443aa MW: 50421.9 Da PI: 8.5381

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952492.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.8	7.2e-29	71	156	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+++r++++++++++++k+plW+evs+ m +e+ ++rs k+C+ek+enl k+ykk+k+g+ +r ++ +++++f+qlea XP_022952492.1 71 RWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMaEEHNYQRSGKKCREKFENLYKYYKKTKDGKAGR--QDGKNYRFFRQLEA 156 8***********************************889*************************97..66678*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDDQYSLSDL RHLITAPPRS HFPSSSIPHH DLASTAFRHH HTPYDLIRSQ PTTVLGSASP 60 TSFDAQTTTA RWPRQETLTL LDVRSRLDSK FKEANQKGPL WDEVSRIMAE EHNYQRSGKK 120 CREKFENLYK YYKKTKDGKA GRQDGKNYRF FRQLEALYGE TSNATSLPDS HFVGDGNLIF 180 QQDGTSNPTS GHMSYDAQLK HYCDSLSLSN TSEFETSVSS DGNDEFGSVN DSVEKRKRRA 240 GKCWKVKIKQ FIGLQMRKLI DKQEAGLEKL MKTLEQKEKA RMVWEEEWRK QEVSRIERER 300 SFWAKERAWI EARDAALMEA LQKLTGKELI TAEPHQNEDG SEILNNYQTK TMDQTNKKRK 360 DNSRSPTTTY NLYFQTDSSV YGGGGRGAEM KEQSPNSSNA GGSGGGSQVV QDSCFFLMGE 420 GDQSQSGLWE NFGLKLNNGS HRT

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDDQYSLSDL RHLITAPPRS HFPSSSIPHH DLASTAFRHH HTPYDLIRSQ PTTVLGSASP  60
TSFDAQTTTA RWPRQETLTL LDVRSRLDSK FKEANQKGPL WDEVSRIMAE EHNYQRSGKK  120
CREKFENLYK YYKKTKDGKA GRQDGKNYRF FRQLEALYGE TSNATSLPDS HFVGDGNLIF  180
QQDGTSNPTS GHMSYDAQLK HYCDSLSLSN TSEFETSVSS DGNDEFGSVN DSVEKRKRRA  240
GKCWKVKIKQ FIGLQMRKLI DKQEAGLEKL MKTLEQKEKA RMVWEEEWRK QEVSRIERER  300
SFWAKERAWI EARDAALMEA LQKLTGKELI TAEPHQNEDG SEILNNYQTK TMDQTNKKRK  360
DNSRSPTTTY NLYFQTDSSV YGGGGRGAEM KEQSPNSSNA GGSGGGSQVV QDSCFFLMGE  420
GDQSQSGLWE NFGLKLNNGS HRT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	262	KRKRRAGKCWKVKIKQFIGLQMRKLIDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	2e-95	Trihelix family protein