PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952535.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 481aa MW: 51583.7 Da PI: 8.6607

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952535.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.7e-31	241	299	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_022952535.1 241 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 299 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MNFFPADDKS RVLLDSKLAS RNRSPTKLDF NVNTGLNLLT TNSSSDQSMV DDGVSPNPED 60 KRAKNERAVL QAELERLKSE NLRLKDMLNQ VTSNYQALQM HLATLIQTQK AADVADQIEE 120 KSASAQEKVR HGGGCNTNKL VPRQFMDLGL ATNADTDDLS MSSDGRSGEL SRSPVTTGEV 180 ASSKRHSPDQ ASNWSSNNNN KVPKLGSSSS SSSAKDADQT ESTMRKARVS VRARSEAPMI 240 TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDKTILIT TYEGNHNHPL 300 PPAAMAMAST TSSAARMLLS GSMSSADGLM NPNFLARTLL PCSSSMATIS ASAPFPTVTL 360 DLTQTPNPLF QRPAAGHFPI SFAATPPQSF PQIFGHALYN QSKFSGLQMS KDMEAPPPPP 420 ALQNPLADTL SAASAAIASD PNFIAALATA MTSLIGGSHH QKENGNGNSN VDNNTTSNSQ 480 Q

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MNFFPADDKS RVLLDSKLAS RNRSPTKLDF NVNTGLNLLT TNSSSDQSMV DDGVSPNPED  60
KRAKNERAVL QAELERLKSE NLRLKDMLNQ VTSNYQALQM HLATLIQTQK AADVADQIEE  120
KSASAQEKVR HGGGCNTNKL VPRQFMDLGL ATNADTDDLS MSSDGRSGEL SRSPVTTGEV  180
ASSKRHSPDQ ASNWSSNNNN KVPKLGSSSS SSSAKDADQT ESTMRKARVS VRARSEAPMI  240
TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDKTILIT TYEGNHNHPL  300
PPAAMAMAST TSSAARMLLS GSMSSADGLM NPNFLARTLL PCSSSMATIS ASAPFPTVTL  360
DLTQTPNPLF QRPAAGHFPI SFAATPPQSF PQIFGHALYN QSKFSGLQMS KDMEAPPPPP  420
ALQNPLADTL SAASAAIASD PNFIAALATA MTSLIGGSHH QKENGNGNSN VDNNTTSNSQ  480
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-116	WRKY family protein