PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952584.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 572aa MW: 65045.9 Da PI: 6.5552

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952584.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	45.3	1.9e-14	263	314	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+ e ++F +a+++LG +k Pk il+lm+ ++Ltl +v+ HLQkY+ XP_022952584.1 263 SRIVWNLERRRKFSDALNKLG--DKCRPKLILKLMNEPCLTLRQVANHLQKYKA 314 69****************5..889************************85 PP
2	Myb_DNA-binding	22.1	3.5e-07	267	313	4	48
S-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 W e ++ da ++lG + ++k+I + m+ +tl q+ +++qky+ XP_022952584.1 267 WNLERRRKFSDALNKLGDKcRPKLILKLMNePCLTLRQVANHLQKYK 313 55555679*******99********999**********7 PP
3	Response_reg	51.3	6.3e-18	21	126	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vd e l ++ l ++l+++ y +v+++ g al +++ek +Dl++ ++mp+md + +l + + + + +i+++++ + + a++al G XP_022952584.1 21 ILVVDHETLSLKHLSSLLRQQSY-NVTTTGLGCIALSMIQEKGdqFDLVMANVSMPDMDSFSFLHMLLKMN--ITVIFMSSTMNLKVATKALAEG 112 89*******************.***********999889******************9865..****************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 a fl Kp+++++l XP_022952584.1 113 ACYFLQKPISKDDL 126 *********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MHEMDHWVPD SLPSFAKKLH ILVVDHETLS LKHLSSLLRQ QSYNVTTTGL GCIALSMIQE 60 KGDQFDLVMA NVSMPDMDSF SFLHMLLKMN ITVIFMSSTM NLKVATKALA EGACYFLQKP 120 ISKDDLKYVW QHVYRSNINI AKLTDKANCV DKAKYGQEFV GFQNGNPVVL SQSTDAASYN 180 NNYSINYQLM SHNEKVQNMS TNSHDTLVAS YFEGERSADD DVEGTNKEER VTYYSKPTNF 240 GHTKADEDNG RGKEYYISRN TRSRIVWNLE RRRKFSDALN KLGDKCRPKL ILKLMNEPCL 300 TLRQVANHLQ KYKAQVESIR KGRKNKLAPR MEASKFDCSV TTQLPPSVQR HQNHEANNSI 360 QQNHEANKST QQNHETNKST QGGSTSLSGG KRFRLIAPKP PLNPRLLVSA NFVNHGLRML 420 DHNFQHVASN YNSVPYNINK TTPEVTSYRA FDEIQFPDIH QVDAAQQLEA MEFCGTSEGI 480 QLMSKNIALP GSTNLDNIAA NFGNEGIQQQ FAEYDYLLNV LEDDPYDFRN DFSLSDVDKY 540 SEWLRNTILE DESGLDSFIN DEAENFPVEI NP

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MHEMDHWVPD SLPSFAKKLH ILVVDHETLS LKHLSSLLRQ QSYNVTTTGL GCIALSMIQE  60
KGDQFDLVMA NVSMPDMDSF SFLHMLLKMN ITVIFMSSTM NLKVATKALA EGACYFLQKP  120
ISKDDLKYVW QHVYRSNINI AKLTDKANCV DKAKYGQEFV GFQNGNPVVL SQSTDAASYN  180
NNYSINYQLM SHNEKVQNMS TNSHDTLVAS YFEGERSADD DVEGTNKEER VTYYSKPTNF  240
GHTKADEDNG RGKEYYISRN TRSRIVWNLE RRRKFSDALN KLGDKCRPKL ILKLMNEPCL  300
TLRQVANHLQ KYKAQVESIR KGRKNKLAPR MEASKFDCSV TTQLPPSVQR HQNHEANNSI  360
QQNHEANKST QQNHETNKST QGGSTSLSGG KRFRLIAPKP PLNPRLLVSA NFVNHGLRML  420
DHNFQHVASN YNSVPYNINK TTPEVTSYRA FDEIQFPDIH QVDAAQQLEA MEFCGTSEGI  480
QLMSKNIALP GSTNLDNIAA NFGNEGIQQQ FAEYDYLLNV LEDDPYDFRN DFSLSDVDKY  540
SEWLRNTILE DESGLDSFIN DEAENFPVEI NP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	275	ERRRKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	3e-38	ARR-B family protein