PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952588.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 267aa    MW: 30693 Da    PI: 9.8645
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952588.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.97.5e-1515105186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt   + +Liea  e++ +l+rg+l+ ++W+e+++++     +er+  r+++qCk++++ l+++yk +k++ ++        +p+f+ l+
  XP_022952588.1  15 CWTLYDTSTLIEAWGERHIDLNRGSLRLKHWQEIANAVnsshgHERKSIRTAIQCKNRIDTLKRKYKIEKARIQESGGSYDCAWPFFSCLD 105
                     7**************************************99999999999********************998887555555899999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MALSLPSPAP VREDCWTLYD TSTLIEAWGE RHIDLNRGSL RLKHWQEIAN AVNSSHGHER  60
KSIRTAIQCK NRIDTLKRKY KIEKARIQES GGSYDCAWPF FSCLDDLIGN NHKASTPVAV  120
SNCKAAPVTT PRLSLFSKVP VAPRSGTKKR RSTHVYRSFC DSYLRRDVIS NENEGKNSME  180
SDNSLSSSRF KDREAGYRKL AEAIGTITDI YERVEVAKQR HMIELEMQRM QFVKDLEYQR  240
MQLLMEMQLQ IQKIKRARRA SGADCYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-49Trihelix family protein