PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952593.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARR-B
Protein Properties Length: 569aa    MW: 64699.5 Da    PI: 6.556
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952593.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.91.9e-12263311255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      r++W+ e  ++F +a+++LG      Pk il+lm+ ++Ltl +v+ HLQkY+ 
  XP_022952593.1 263 SRIVWNLERRRKFSDALNKLG-----RPKLILKLMNEPCLTLRQVANHLQKYKA 311
                     69******************4.....6*************************85 PP
2Response_reg51.36.3e-18211261107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd e l ++ l ++l+++ y +v+++  g  al +++ek   +Dl++  ++mp+md + +l  + + +  + +i+++++ + + a++al  G
  XP_022952593.1  21 ILVVDHETLSLKHLSSLLRQQSY-NVTTTGLGCIALSMIQEKGdqFDLVMANVSMPDMDSFSFLHMLLKMN--ITVIFMSSTMNLKVATKALAEG 112
                     89*********************.***************999889**********************9865..********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  fl Kp+++++l
  XP_022952593.1 113 ACYFLQKPISKDDL 126
                     ***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    
MHEMDHWVPD SLPSFAKKLH ILVVDHETLS LKHLSSLLRQ QSYNVTTTGL GCIALSMIQE  60
KGDQFDLVMA NVSMPDMDSF SFLHMLLKMN ITVIFMSSTM NLKVATKALA EGACYFLQKP  120
ISKDDLKYVW QHVYRSNINI AKLTDKANCV DKAKYGQEFV GFQNGNPVVL SQSTDAASYN  180
NNYSINYQLM SHNEKVQNMS TNSHDTLVAS YFEGERSADD DVEGTNKEER VTYYSKPTNF  240
GHTKADEDNG RGKEYYISRN TRSRIVWNLE RRRKFSDALN KLGRPKLILK LMNEPCLTLR  300
QVANHLQKYK AQVESIRKGR KNKLAPRMEA SKFDCSVTTQ LPPSVQRHQN HEANNSIQQN  360
HEANKSTQQN HETNKSTQGG STSLSGGKRF RLIAPKPPLN PRLLVSANFV NHGLRMLDHN  420
FQHVASNYNS VPYNINKTTP EVTSYRAFDE IQFPDIHQVD AAQQLEAMEF CGTSEGIQLM  480
SKNIALPGST NLDNIAANFG NEGIQQQFAE YDYLLNVLED DPYDFRNDFS LSDVDKYSEW  540
LRNTILEDES GLDSFINDEA ENFPVEINP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270275ERRRKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.16e-38ARR-B family protein