PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952602.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 559aa MW: 63226.9 Da PI: 6.5654

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952602.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	45.3	1.9e-14	250	301	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+ e ++F +a+++LG +k Pk il+lm+ ++Ltl +v+ HLQkY+ XP_022952602.1 250 SRIVWNLERRRKFSDALNKLG--DKCRPKLILKLMNEPCLTLRQVANHLQKYKA 301 69****************5..889************************85 PP
2	Myb_DNA-binding	22.2	3.4e-07	254	300	4	48
S-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 W e ++ da ++lG + ++k+I + m+ +tl q+ +++qky+ XP_022952602.1 254 WNLERRRKFSDALNKLGDKcRPKLILKLMNePCLTLRQVANHLQKYK 300 55555679*******99********999**********7 PP
3	Response_reg	38.6	5.7e-14	22	113	13	107
HHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HH CS Response_reg 13 llrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpe 105 l++++le + +v+++ g al +++ek +Dl++ ++mp+md + +l + + + + +i+++++ + + a++al Ga fl Kp++++ XP_022952602.1 22 LFQSLLE--AL-KVTTTGLGCIALSMIQEKGdqFDLVMANVSMPDMDSFSFLHMLLKMN--ITVIFMSSTMNLKVATKALAEGACYFLQKPISKD 111 5555555..66.88999999999**988888******************9865..*******************************9 PP HH CS Response_reg 106 el 107 +l XP_022952602.1 112 DL 113 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MNVSVFAPNS ARCCLQPHAS SLFQSLLEAL KVTTTGLGCI ALSMIQEKGD QFDLVMANVS 60 MPDMDSFSFL HMLLKMNITV IFMSSTMNLK VATKALAEGA CYFLQKPISK DDLKYVWQHV 120 YRSNINIAKL TDKANCVDKA KYGQEFVGFQ NGNPVVLSQS TDAASYNNNY SINYQLMSHN 180 EKVQNMSTNS HDTLVASYFE GERSADDDVE GTNKEERVTY YSKPTNFGHT KADEDNGRGK 240 EYYISRNTRS RIVWNLERRR KFSDALNKLG DKCRPKLILK LMNEPCLTLR QVANHLQKYK 300 AQVESIRKGR KNKLAPRMEA SKFDCSVTTQ LPPSVQRHQN HEANNSIQQN HEANKSTQQN 360 HETNKSTQGG STSLSGGKRF RLIAPKPPLN PRLLVSANFV NHGLRMLDHN FQHVASNYNS 420 VPYNINKTTP EVTSYRAFDE IQFPDIHQVD AAQQLEAMEF CGTSEGIQLM SKNIALPGST 480 NLDNIAANFG NEGIQQQFAE YDYLLNVLED DPYDFRNDFS LSDVDKYSEW LRNTILEDES 540 GLDSFINDEA ENFPVEINP

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MNVSVFAPNS ARCCLQPHAS SLFQSLLEAL KVTTTGLGCI ALSMIQEKGD QFDLVMANVS  60
MPDMDSFSFL HMLLKMNITV IFMSSTMNLK VATKALAEGA CYFLQKPISK DDLKYVWQHV  120
YRSNINIAKL TDKANCVDKA KYGQEFVGFQ NGNPVVLSQS TDAASYNNNY SINYQLMSHN  180
EKVQNMSTNS HDTLVASYFE GERSADDDVE GTNKEERVTY YSKPTNFGHT KADEDNGRGK  240
EYYISRNTRS RIVWNLERRR KFSDALNKLG DKCRPKLILK LMNEPCLTLR QVANHLQKYK  300
AQVESIRKGR KNKLAPRMEA SKFDCSVTTQ LPPSVQRHQN HEANNSIQQN HEANKSTQQN  360
HETNKSTQGG STSLSGGKRF RLIAPKPPLN PRLLVSANFV NHGLRMLDHN FQHVASNYNS  420
VPYNINKTTP EVTSYRAFDE IQFPDIHQVD AAQQLEAMEF CGTSEGIQLM SKNIALPGST  480
NLDNIAANFG NEGIQQQFAE YDYLLNVLED DPYDFRNDFS LSDVDKYSEW LRNTILEDES  540
GLDSFINDEA ENFPVEINP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	262	ERRRKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	2e-30	ARR-B family protein