PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952658.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 229aa MW: 25049.2 Da PI: 7.3585

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952658.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00063	129	166	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+ YIk L XP_022952658.1 129 RKEKLGERITALQQLVSPF-----GKTDTASVLHEAMGYIKFL 166 6678889999999999998.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MAENQSSGRD PKTAAATTFS QLLFSANHDE DDDIDVDKHH HVHHQIFEYS VSSSFAIENP 60 PKMLCFGTKQ EQEHPQLGLR SAHACSDSVK RKNGSNPETT AIKPAPLSNQ KASKKTKPEA 120 PCSAGHAKRK EKLGERITAL QQLVSPFGKT DTASVLHEAM GYIKFLHEQI QVLYSPYLDK 180 NQLGGGNGDT EGELKGRGLC LIPVECSLHL ANCTVADFWS PAMAMGRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19500.1	1e-40	bHLH family protein