PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952696.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 790aa MW: 91022.6 Da PI: 6.726

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952696.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100	2.5e-31	82	173	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ ++ eHnHel+p XP_022952696.1 82 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRtkDREIKRPRTITRVGCKASLSVKMHDSGKWVVSGFVREHNHELVP 173 9*************************************999888555667889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MDNEVIEFDI GLGGGSGREG DDYSIGMVHH SIEDEEMVDS PPLSSLGGGA GSGEIYLPEG 60 DLLDLEPYEG MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF 120 RNMNEKRTKD REIKRPRTIT RVGCKASLSV KMHDSGKWVV SGFVREHNHE LVPPDQVHCL 180 RSHRQISGPA KTLIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRNNRQRSL 240 EGDIQLLLDY LRQMHSENPN FFYAVQGEED QCVGNVFWAD PKARMNYTYF GDTVTFDTTY 300 RSNRYRLPFA PFTGVNHHGQ PVLFGCAFLI NESEASFNWL FRTWLLAMSG RPPVSITTDH 360 DAIIQSAITQ VFPETRHRFC KWHIFKKCQE MLSHVFLKHP SFEADFHKCV NLTDSIEEFE 420 SCWLSLVDRY DLRDHEWLQT IYSARRQWVP VYLRDTFFAE MSITQRSDSM NSYFDGYVNA 480 STNLSQFFKL YEKALESRNE KEVKADYDTM NTSPVLKTPS PMEKQVSELY TRKLFSRFQE 540 ELVGTLTFMA SKADDDGDII TYQVAKFGED HKAHYVKFNV LEMRASCSCQ MFEFSGLLCG 600 HILAVFRVTN VLTLPSYYIL KRWTRNAKSN IMLDNHVNDI YNNYLESHTV RYNTLRHEAF 660 KFIEEGAKTV DTYNVAKDAL QEAAKRVAHT TRNDGKNSTI NGRIKMDPGN DRSYTYHSSS 720 RDHDEILSKN MSEDDLDKKI NELTNELECA NRKCDVYRSN LFSMLKDIED HKLQLSIKVQ 780 NIKISMKDSI

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MDNEVIEFDI GLGGGSGREG DDYSIGMVHH SIEDEEMVDS PPLSSLGGGA GSGEIYLPEG  60
DLLDLEPYEG MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF  120
RNMNEKRTKD REIKRPRTIT RVGCKASLSV KMHDSGKWVV SGFVREHNHE LVPPDQVHCL  180
RSHRQISGPA KTLIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRNNRQRSL  240
EGDIQLLLDY LRQMHSENPN FFYAVQGEED QCVGNVFWAD PKARMNYTYF GDTVTFDTTY  300
RSNRYRLPFA PFTGVNHHGQ PVLFGCAFLI NESEASFNWL FRTWLLAMSG RPPVSITTDH  360
DAIIQSAITQ VFPETRHRFC KWHIFKKCQE MLSHVFLKHP SFEADFHKCV NLTDSIEEFE  420
SCWLSLVDRY DLRDHEWLQT IYSARRQWVP VYLRDTFFAE MSITQRSDSM NSYFDGYVNA  480
STNLSQFFKL YEKALESRNE KEVKADYDTM NTSPVLKTPS PMEKQVSELY TRKLFSRFQE  540
ELVGTLTFMA SKADDDGDII TYQVAKFGED HKAHYVKFNV LEMRASCSCQ MFEFSGLLCG  600
HILAVFRVTN VLTLPSYYIL KRWTRNAKSN IMLDNHVNDI YNNYLESHTV RYNTLRHEAF  660
KFIEEGAKTV DTYNVAKDAL QEAAKRVAHT TRNDGKNSTI NGRIKMDPGN DRSYTYHSSS  720
RDHDEILSKN MSEDDLDKKI NELTNELECA NRKCDVYRSN LFSMLKDIED HKLQLSIKVQ  780
NIKISMKDSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein