PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952730.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 314aa    MW: 35947.4 Da    PI: 7.9717
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952730.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.85.2e-54111411129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + +el +vi+evd++k+ePwdL+   ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  XP_022952730.1  11 VPPGFRFHPTDEELLYYYLRKKVSYEAIEL-DVIREVDLNKLEPWDLKDtcRIGSgHQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKGI 104
                     69****************************.9***************843455443566************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     + ++++ +g++ktLvfy+grap+g+ktdW+mheyrle
  XP_022952730.1 105 HMANSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141
                     ***********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMPENGQHFS VPPGFRFHPT DEELLYYYLR KKVSYEAIEL DVIREVDLNK LEPWDLKDTC  60
RIGSGHQNEW YFFSHKDKKY PTGTRTNRAT SAGFWKATGR DKGIHMANSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDQDPEIQTQ EDGWVVCRVF KKKSQKAEGL EYHAHTKVGG  180
SSSGSAALMG AEIGEPKSHN HTQQPYNEYG FDGCMQLPQL FSPDSAVATP ISIECPQNTW  240
RLNCGGVQQE RLNTDWSFLS RLLASDHQSR TKSALPDQLS VGHPNSTMFS FPFPFPFPYP  300
YHLPSAADLF KFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-102NAC family protein