PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952732.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 312aa    MW: 35718.2 Da    PI: 7.9717
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952732.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.85.1e-54111411129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + +el +vi+evd++k+ePwdL+   ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  XP_022952732.1  11 VPPGFRFHPTDEELLYYYLRKKVSYEAIEL-DVIREVDLNKLEPWDLKDtcRIGSgHQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKGI 104
                     69****************************.9***************843455443566************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     + ++++ +g++ktLvfy+grap+g+ktdW+mheyrle
  XP_022952732.1 105 HMANSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141
                     ***********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMPENGQHFS VPPGFRFHPT DEELLYYYLR KKVSYEAIEL DVIREVDLNK LEPWDLKDTC  60
RIGSGHQNEW YFFSHKDKKY PTGTRTNRAT SAGFWKATGR DKGIHMANSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDQDPEIQED GWVVCRVFKK KSQKAEGLEY HAHTKVGGSS  180
SGSAALMGAE IGEPKSHNHT QQPYNEYGFD GCMQLPQLFS PDSAVATPIS IECPQNTWRL  240
NCGGVQQERL NTDWSFLSRL LASDHQSRTK SALPDQLSVG HPNSTMFSFP FPFPFPYPYH  300
LPSAADLFKF SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-103NAC family protein