PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952792.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 278aa    MW: 30872.1 Da    PI: 7.9829
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952792.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-1157100855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP++      K++K++ + +Av++Ik Lq
  XP_022952792.1  57 TERERRKKMRTMFANLHALLPHL----PAKVDKSSLVDEAVNHIKTLQ 100
                     6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSSLHHLPWA LLNSCSDIDH FPPPPTQSGK KRDAAAVAAE RKSCGGAASA HDIHIWTERE  60
RRKKMRTMFA NLHALLPHLP AKVDKSSLVD EAVNHIKTLQ QTLQNLHKQK LERLNNDTNP  120
SLSFSKIVHH PSARSSAAMT REAFLADQAS STNDMSSTLF PQLSTAAAAG DDVVSILPSP  180
PSSFQTWLSS NLVLNVCGHH AHFCICSVKK PGLFPTLCYV LEKHQIHVVS AHVSSDYHRS  240
FFMIHAHVNR VYDEFEAATV VEDTFKEAAR EIIFWLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-43bHLH family protein