PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952800.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 336aa    MW: 37600.2 Da    PI: 5.2063
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952800.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.71.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lv++++ +G+g+W+  ++  g++R++k+c++rw +yl
   XP_022952800.1 14 KGPWTPEEDQKLVRYIQIHGPGNWRNLPKNAGLRRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.78.6e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr+  eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
   XP_022952800.1  67 RGRFAFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      899999****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MGRAPCCDKN GLKKGPWTPE EDQKLVRYIQ IHGPGNWRNL PKNAGLRRCG KSCRLRWTNY  60
LRPDIKRGRF AFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHTPRI DLLDLPSILT AAICSHPLLS LSTLLNNNQA AGLNSESLRL ISTLLAIKQE  180
DPNDNRFLLQ AQAQAQLQAQ MDTLSQLLQP NDNVNDANAS SMPISTFDEF PYSQENLNFL  240
PSNLSGGDVL VNQPNYVYGE NGSNPTASDL PEIWNNDVQN LGFDCVISTP KSSPTPLNSS  300
STCVNNSSSN EDERDSYCSN FLQFEIPEGL DFADLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.12e-95MYB family protein