PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952972.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1365aa MW: 152962 Da PI: 6.3511

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952972.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	19	75	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+++ ++yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022952972.1 19 KTKRKMKTASQLEILEKAYMVEPYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 75 6799***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1365 aa Download sequence
MEVSSEGEKK PPPPVEATKT KRKMKTASQL EILEKAYMVE PYPSEALRAE LSVKLGLSDR 60 QLQMWFCHRR LKDRKPPPVK QPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH 120 PVDVRPGVAV ARIGLNLPSM NKFYESQQSI AELRAIALVE AQLGEALRED GPILGMEFDP 180 LPPGAFGAPI GVTAVSDDEK KTGQFFEGSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK 240 SDERERDTSS YQYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLNIVAQQ 300 SRRSHNLLSS MGEHDNSLCR SSLVNISMNP LYGTHSTSHP EFTSVLSDKR VVRGNNVVWI 360 EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREEQI RKEMERHDRE RRREEERLLR 420 EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ 480 MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKGMRPNF PPESVQMRRP 540 FPDHPWIESE ANVGNLLMAW KFLVTFADVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL 600 KCIIKDVEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE 660 ILRQLALSGG FGPQQRKGGN AEPAHHDENE QGNDVADIIS NLRNGLAAEK AVAIMQERGF 720 SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA 780 ALSRDSKLFE RTAPSTYCVR SPYRKDPGDA DAILSTARER IRTFKSGILD GDDAERDDGS 840 EVDVPEDAEV HDLGTGGNLT KQHQSPEVCP LDEMTSVASG NGCNEISDIC KVGMANGGPY 900 TAILDIKGRV KGEESPPIEQ PIYISGICIG QYQEDSTSDE GDHGEPWVQG LTEGEYSDLS 960 VEERLNALCS LIGVALEGNS MRTVLEERLE AANSLKKQML AEAQIDKRRV KEEYVLQIHD 1020 SSSVGNKSEF KTMSSLDATR LSAILNIGEE NREGPLDTGF QQEDCHSSHN NCPSEGLQVQ 1080 DVLVEADNSQ LQHSVVAVEK SRSQVKSYIG HKAEEMYVYR SLPLGQDRRR NRYWQFTSSA 1140 SRNEPGNGRI FVELHNGSWR LIDSAKGFDA LLASLDVRGI RESHLHLMLQ KLEKSFKTAT 1200 RGNILQDSQR TGEDAAGQHC NAHNNGPSNT VYADNHDGFE SSTSFRSEAE ETGSDTTESL 1260 KRYLDFESWM RRECFSLSVL SANKHGKKQG TQLLENIGLS WCSSSPLRIR LLKMLLTLIE 1320 VSIPGEAFQP SWTDFERKTW SSKLLSSSSA EDVLQMTHYF VIPQL

Sequence ? help Back to Top

Protein Sequence Length: 1365 aa Download sequence

MEVSSEGEKK PPPPVEATKT KRKMKTASQL EILEKAYMVE PYPSEALRAE LSVKLGLSDR  60
QLQMWFCHRR LKDRKPPPVK QPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH  120
PVDVRPGVAV ARIGLNLPSM NKFYESQQSI AELRAIALVE AQLGEALRED GPILGMEFDP  180
LPPGAFGAPI GVTAVSDDEK KTGQFFEGSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK  240
SDERERDTSS YQYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLNIVAQQ  300
SRRSHNLLSS MGEHDNSLCR SSLVNISMNP LYGTHSTSHP EFTSVLSDKR VVRGNNVVWI  360
EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREEQI RKEMERHDRE RRREEERLLR  420
EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ  480
MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKGMRPNF PPESVQMRRP  540
FPDHPWIESE ANVGNLLMAW KFLVTFADVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL  600
KCIIKDVEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE  660
ILRQLALSGG FGPQQRKGGN AEPAHHDENE QGNDVADIIS NLRNGLAAEK AVAIMQERGF  720
SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA  780
ALSRDSKLFE RTAPSTYCVR SPYRKDPGDA DAILSTARER IRTFKSGILD GDDAERDDGS  840
EVDVPEDAEV HDLGTGGNLT KQHQSPEVCP LDEMTSVASG NGCNEISDIC KVGMANGGPY  900
TAILDIKGRV KGEESPPIEQ PIYISGICIG QYQEDSTSDE GDHGEPWVQG LTEGEYSDLS  960
VEERLNALCS LIGVALEGNS MRTVLEERLE AANSLKKQML AEAQIDKRRV KEEYVLQIHD  1020
SSSVGNKSEF KTMSSLDATR LSAILNIGEE NREGPLDTGF QQEDCHSSHN NCPSEGLQVQ  1080
DVLVEADNSQ LQHSVVAVEK SRSQVKSYIG HKAEEMYVYR SLPLGQDRRR NRYWQFTSSA  1140
SRNEPGNGRI FVELHNGSWR LIDSAKGFDA LLASLDVRGI RESHLHLMLQ KLEKSFKTAT  1200
RGNILQDSQR TGEDAAGQHC NAHNNGPSNT VYADNHDGFE SSTSFRSEAE ETGSDTTESL  1260
KRYLDFESWM RRECFSLSVL SANKHGKKQG TQLLENIGLS WCSSSPLRIR LLKMLLTLIE  1320
VSIPGEAFQP SWTDFERKTW SSKLLSSSSA EDVLQMTHYF VIPQL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	23	KKPPPPVEATKTKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein