PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953002.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 329aa    MW: 36507 Da    PI: 4.8161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953002.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.3e-09188230855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+++ ++   L++llP++     kK++ a++Le+A++Y+k Lq
  XP_022953002.1 188 LARQRRQKLSDKTRCLQKLLPWD-----KKMDIATMLEEACKYVKFLQ 230
                     679*******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
METSAGDDAS STVWDDACFD AMFSGVSLQS FLAGGSQSHT LLPSLFGGCY VADSLTFPDG  60
MTSLYPQVSS NFVAESTASS DGPFFKLPKS EPMSVYEQTE TQESTFLFHD STSFPHLPDL  120
RSLEQCSSSF NKRARVDSVM NPLQMVEPMV RTCEGFQNFF VPYEYKHSPD LTTSAAVSPA  180
VQIPRSALAR QRRQKLSDKT RCLQKLLPWD KKMDIATMLE EACKYVKFLQ AQLLALQSMP  240
RESAISSYSN NHYITELLRF LGRTVGPYPE DRGETSSAAA NVDIPSQALV SDRVPPFVIQ  300
TDGTVKVQKN SYLSVMTPSD HENEVQNFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-15bHLH family protein