PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953029.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 306aa    MW: 33778.1 Da    PI: 4.5964
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953029.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-112302701055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022953029.1 230 RKRRERINERLKILQTLVPNG-----TKVDISTMLEEAVQYVKFLQ 270
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAHLTAPTAE GDDQWSSLNG AFTADEEEAT FVAQLFAPPD PFMANLHDLH QPPCEPASCS  60
SFYRVSQESS EFSGGSYCSQ LLFSGSENND NYYYCNPMDN HDFSLGELGN NNGGFQLEDH  120
EDSMNIEAVV GEEGGNPRDI NCKKRSRGFG DLQKRRNEKS KKTQKLITEE DGNNAAHNRQ  180
STSSYCSEDE SNASLELNGG VNNSGPSPNG PTKSRASRGS ATDPQSLYAR KRRERINERL  240
KILQTLVPNG TKVDISTMLE EAVQYVKFLQ LQIKLLSSDD LWMYAPIAYN GMDIGLNPTP  300
NTPKVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.17e-56bHLH family protein