PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953155.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 300aa    MW: 33377.4 Da    PI: 7.6675
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953155.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.31.1e-1780132456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + +++ eq+++Le+ Fe  +++  e++ +LAk lgL+ rq+ +WFqNrRa++k
  XP_022953155.1  80 KKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWK 132
                     4568889*********************************************9 PP
2HD-ZIP_I/II126.51.1e-4078169192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekk+rl+ eqvk+LE+sFe  +kLeperK +la++Lglqprq+a+WFqnrRAR+ktkqlE+dy++Lk++++alk++n+ L++++++L+++l 
  XP_022953155.1  78 EKKKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDVLKKQFEALKADNDVLQAQNTKLHAQLL 169
                     69**************************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MASPHHSHSF MFQSRPADHH DYAPTASFNN IPLCPPHLYF HDGVVPLMMK RSMSFSENGC  60
EEVNGDEGLS DDGSALGEKK KRLNLEQVKA LEKSFELGNK LEPERKLQLA KALGLQPRQI  120
AIWFQNRRAR WKTKQLERDY DVLKKQFEAL KADNDVLQAQ NTKLHAQLLA LKTKDSGEVA  180
AGGSATVNLK KENERCWSSD NSCDINLEIS RTQAPITSNG SSGGRGCSQP GIKDLFPSAA  240
FRSAAITQLL QHGSSRSTVN HSPVIQEESF TQMFNGMEAQ PQTTAAGFWP WSSDQNSHFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127135RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01220.13e-81HD-ZIP family protein