PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953246.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 293aa MW: 33724.7 Da PI: 7.6159

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953246.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	1e-32	131	188	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk++++prsYYrCts C+vkk+ver +dp++v++tYeg+H+h+ XP_022953246.1 131 EDGYRWRKYGQKAVKNNPYPRSYYRCTSVACNVKKRVERYLKDPSIVVTTYEGQHTHP 188 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MDEVAAADSL QFPFLENQSC LRFMELIAVD QEFSSQFDVF SLSSLSSSLI TNPVENLEIG 60 NQWPTTSNYS SSSEIVNDEV IEPKLEREEK QHSRQTLKTD KQMKTKKMTR KKKDQEPRFA 120 FMTKSEVDHL EDGYRWRKYG QKAVKNNPYP RSYYRCTSVA CNVKKRVERY LKDPSIVVTT 180 YEGQHTHPSP NMTRTTFFPP PISTTLYNGS AMFTTATTTP SLFHYQNGHN SNFINHPKGF 240 VASSFHPPCD VAPSNHANQF FAATINHRLF QDIAPFQYEE LTWRDCSISQ NPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	1e-43	WRKY family protein