PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953322.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 141aa    MW: 15692.1 Da    PI: 5.8054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953322.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-201869256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdps ng  +r +lg+f+taeeAa+a+++a+ +++g+
  XP_022953322.1 18 RYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFDTAEEAARAYDQAAYAFRGH 69
                    69*******.**********98887..*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MEGKKTGNGG KRSTNEARYR GIRRRPWGKF AAEIRDPSRN GARLWLGTFD TAEEAARAYD  60
QAAYAFRGHL AILNFPNEYQ SGNPHFAAAP SSSATTISFV GNYSGSNANY RSGEVIEFEY  120
LDNELLEELL QSEGEGFDRN N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.15e-28ERF family protein